mraginsky + biology   14

[1012.4863] Dynamical quorum-sensing and synchronization of nonlinear oscillators coupled through an external medium
"Many biological and physical systems exhibit population-density dependent transitions to synchronized oscillations in a process often termed "dynamical quorum sensing". Synchronization frequently arises through chemical communication via signaling molecules distributed through an external media. We study a simple theoretical model for dynamical quorum sensing: a heterogenous population of limit-cycle oscillators diffusively coupled through a common media. We show that this model exhibits a rich phase diagram with four qualitatively distinct mechanisms fueling population-dependent transitions to global oscillations, including a new type of transition we term "dynamic death". We derive a single pair of analytic equations that allows us to calculate all phase boundaries as a function of population density and show that the model reproduces many of the qualitative features of recent experiments of BZ catalytic particles as well as synthetically engineered bacteria."
papers  to-read  biology  dynamical-systems  cells  control-theory  feedback 
january 2011 by mraginsky
Carl T. Bergstrom - University of Washington
"Information in biological systems. How do living organisms acquire, store, and make use of information? How and why does communication evolve? How does information flow through biological or social networks?"
people  homepages  research  information-theory  biology  theoretical-biology  communication  social-networks 
august 2010 by mraginsky
Shannon Information and Biological Fitness - The Panda's Thumb
Panda's Thumb says: "The reason why I am excited about these findings is that they tie together: scale free networks, Shannon information, criticality and evolution in a theoretic foundation." As an information theorist, I'm skeptical about this: to us, mutual information is just a number, unless you attach to it an operational meaning and have a coding theorem to go with it. But I will take a look.
to-read  biology  evolution  information-theory  blogs 
september 2009 by mraginsky
Philosophy for ‘limited beings’ accommodates approximations
Review of Re-engineering Philosophy for Limited Beings: Piecewise Approximations to Reality by William Wimsatt (Harvard Press, 2007)
books  philosophy  science  interesting  book-reviews  to-read  epistemology  biology  evolution 
july 2008 by mraginsky
The Stupidity of Dignity
Steven Pinker on the theocons in the President's Council on Bioethics
biology  politics  religion  science  polemics  philosophy  bioethics 
may 2008 by mraginsky
'Speed of Thought' Guides Brain Memory Consolidation | UANews
UA researchers find that the brain processes memories six to seven times faster than real time.
biology  interesting  research  science  neuroscience 
november 2007 by mraginsky

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