[1012.4863] Dynamical quorum-sensing and synchronization of nonlinear oscillators coupled through an external medium
january 2011 by mraginsky
"Many biological and physical systems exhibit population-density dependent transitions to synchronized oscillations in a process often termed "dynamical quorum sensing". Synchronization frequently arises through chemical communication via signaling molecules distributed through an external media. We study a simple theoretical model for dynamical quorum sensing: a heterogenous population of limit-cycle oscillators diffusively coupled through a common media. We show that this model exhibits a rich phase diagram with four qualitatively distinct mechanisms fueling population-dependent transitions to global oscillations, including a new type of transition we term "dynamic death". We derive a single pair of analytic equations that allows us to calculate all phase boundaries as a function of population density and show that the model reproduces many of the qualitative features of recent experiments of BZ catalytic particles as well as synthetically engineered bacteria."
papers
to-read
biology
dynamical-systems
cells
control-theory
feedback
january 2011 by mraginsky
Carl T. Bergstrom - University of Washington
august 2010 by mraginsky
"Information in biological systems. How do living organisms acquire, store, and make use of information? How and why does communication evolve? How does information flow through biological or social networks?"
people
homepages
research
information-theory
biology
theoretical-biology
communication
social-networks
august 2010 by mraginsky
Shannon Information and Biological Fitness - The Panda's Thumb
september 2009 by mraginsky
Panda's Thumb says: "The reason why I am excited about these findings is that they tie together: scale free networks, Shannon information, criticality and evolution in a theoretic foundation." As an information theorist, I'm skeptical about this: to us, mutual information is just a number, unless you attach to it an operational meaning and have a coding theorem to go with it. But I will take a look.
to-read
biology
evolution
information-theory
blogs
september 2009 by mraginsky
Philosophy for ‘limited beings’ accommodates approximations
july 2008 by mraginsky
Review of Re-engineering Philosophy for Limited Beings: Piecewise Approximations to Reality by William Wimsatt (Harvard Press, 2007)
books
philosophy
science
interesting
book-reviews
to-read
epistemology
biology
evolution
july 2008 by mraginsky
The Stupidity of Dignity
may 2008 by mraginsky
Steven Pinker on the theocons in the President's Council on Bioethics
biology
politics
religion
science
polemics
philosophy
bioethics
may 2008 by mraginsky
'Speed of Thought' Guides Brain Memory Consolidation | UANews
november 2007 by mraginsky
UA researchers find that the brain processes memories six to seven times faster than real time.
biology
interesting
research
science
neuroscience
november 2007 by mraginsky
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