cshalizi + state_estimation 25
[1204.1360] Particle filtering in high-dimensional chaotic systems
6 weeks ago by cshalizi
"We present an efficient particle filtering algorithm for multiscale systems, that is adapted for simple atmospheric dynamics models which are inherently chaotic. Particle filters represent the posterior conditional distribution of the state variables by a collection of particles, which evolves and adapts recursively as new information becomes available. The difference between the estimated state and the true state of the system constitutes the error in specifying or forecasting the state, which is amplified in chaotic systems that have a number of positive Lyapunov exponents. The purpose of the present paper is to show that the homogenization method developed in Imkeller et al. (2011), which is applicable to high dimensional multi-scale filtering problems, along with important sampling and control methods can be used as a basic and flexible tool for the construction of the proposal density inherent in particle filtering. Finally, we apply the general homogenized particle filtering algorithm developed here to the Lorenz'96 atmospheric model that mimics mid-latitude atmospheric dynamics with microscopic convective processes."
to:NB
particle_filters
chaos
dynamical_systems
state-space_models
state_estimation
re:stacs
6 weeks ago by cshalizi
[1203.6898] Long-term stability of sequential Monte Carlo methods under verifiable conditions
8 weeks ago by cshalizi
"This paper discusses particle filtering in general hidden Markov models (HMMs) and presents novel theoretical results on the long-term stability of bootstrap-type particle filters. More specifically, we establish that the asymptotic variance of the Monte Carlo estimates produced by the bootstrap filter is uniformly bounded in time. On the contrary to most previous results of this type, which in general presuppose that the state space of the hidden state process is compact (an assumption that is rarely satisfied in practice), our very mild assumptions are satisfied for a large class of HMMs with possibly non-compact state space. In addition, we derive a similar time uniform bound on the asymptotic Lp error. Importantly, our results hold for misspecified models, i.e. we do not at all assume that the data entering into the particle filter originate from the model governing the dynamics of the particles or not even from an HMM."
to:NB
particle_filters
stochastic_processes
time_series
state_estimation
state-space_models
markov_models
statistics
8 weeks ago by cshalizi
[math/0609514] Sequential Monte Carlo smoothing with application to parameter estimation in non-linear state space models
8 weeks ago by cshalizi
"This paper concerns the use of sequential Monte Carlo methods (SMC) for smoothing in general state space models. A well-known problem when applying the standard SMC technique in the smoothing mode is that the resampling mechanism introduces degeneracy of the approximation in the path space. However, when performing maximum likelihood estimation via the EM algorithm, all functionals involved are of additive form for a large subclass of models. To cope with the problem in this case, a modification of the standard method (based on a technique proposed by Kitagawa and Sato) is suggested. Our algorithm relies on forgetting properties of the filtering dynamics and the quality of the estimates produced is investigated, both theoretically and via simulations."
to:NB
statistics
time_series
state_estimation
state-space_models
particle_filters
8 weeks ago by cshalizi
[0810.2123] Forgetting of the initial distribution for non-ergodic Hidden Markov Chains
12 weeks ago by cshalizi
"In this paper, the forgetting of the initial distribution for a non-ergodic Hidden Markov Models (HMM) is studied. A new set of conditions is proposed to establish the forgetting property of the filter, which significantly extends all the existing results. Both a pathwise-type convergence of the total variation distance of the filter started from two different initial distributions, and a convergence in expectation are considered. The results are illustrated using generic models of non-ergodic HMM and extend all the results known so far."
to:NB
filtering
markov_models
state_estimation
stochastic_processes
12 weeks ago by cshalizi
Online Learning with Hidden Markov Models
february 2012 by cshalizi
"We present an online version of the expectation-maximization (EM) algorithm for hidden Markov models (HMMs). The sufficient statistics required for parameters estimation is computed recursively with time, that is, in an online way instead of using the batch forward-backward procedure. This computational scheme is generalized to the case where the model parameters can change with time by introducing a discount factor into the recurrence relations. The resulting algorithm is equivalent to the batch EM algorithm, for appropriate discount factor and scheduling of parameters update. On the other hand, the online algorithm is able to deal with dynamic environments, i.e., when the statistics of the observed data is changing with time. The implications of the online algorithm for probabilistic modeling in neuroscience are briefly discussed."
to:NB
markov_models
filtering
state_estimation
statistics
em_algorithm
february 2012 by cshalizi
[1202.2945] Sequential Monte Carlo smoothing for general state space hidden Markov models
february 2012 by cshalizi
"Computing smoothing distributions, the distributions of one or more states conditional on past, present, and future observations is a recurring problem when operating on general hidden Markov models. The aim of this paper is to provide a foundation of particle-based approximation of such distributions and to analyze, in a common unifying framework, different schemes producing such approximations. In this setting, general convergence results, including exponential deviation inequalities and central limit theorems, are established. In particular, time uniform bounds on the marginal smoothing error are obtained under appropriate mixing conditions on the transition kernel of the latent chain. In addition, we propose an algorithm approximating the joint smoothing distribution at a cost that grows only linearly with the number of particles."
to:NB
filtering
statistics
state_estimation
particle_filters
state-space_models
stochastic_processes
ergodic_theory
moulines.eric
douc.randal
february 2012 by cshalizi
[1111.6801] The direct L2 geometric structure on a manifold of probability densities with applications to Filtering
december 2011 by cshalizi
"In this paper we introduce a projection method for the space of probability distributions based on the differential geometric approach to statistics. This method is based on a direct L2 metric as opposed to the usual Hellinger distance and the related Fisher Information metric. We explain how this apparatus can be used for the nonlinear filtering problem, in relationship also to earlier projection methods based on the Fisher metric. Past projection filters focused on the Fisher metric and the exponential families that made the filter correction step exact. In this work we introduce the mixture projection filter, namely the projection filter based on the direct $L^2$ metric and based on a manifold given by a mixture of pre-assigned densities. The resulting prediction step in the filtering problem is described by a linear differential equation, while the correction step can be made exact."
in_NB
filtering
state_estimation
information_geometry
time_series
december 2011 by cshalizi
[0812.0350] Uniform Time Average Consistency of Monte Carlo Particle Filters
october 2011 by cshalizi
"We prove that bootstrap type Monte Carlo particle filters approximate the optimal nonlinear filter in a time average sense uniformly with respect to the time horizon when the signal is ergodic and the particle system satisfies a tightness property. The latter is satisfied without further assumptions when the signal state space is compact, as well as in the noncompact setting when the signal is geometrically ergodic and the observations satisfy additional regularity assumptions."
to:NB
state_estimation
particle_filters
monte_carlo
stochastic_processes
van_handel.ramon
october 2011 by cshalizi
Carvalho, Johannes, Lopes, Polson: Particle Learning and Smoothing
august 2010 by cshalizi
"Particle learning (PL) provides state filtering, sequential parameter learning and smoothing in a general class of state space models. Our approach extends existing particle methods by incorporating the estimation of static parameters via a fully-adapted filter that utilizes conditional sufficient statistics for parameters and/or states as particles. State smoothing in the presence of parameter uncertainty is also solved as a by-product of PL. In a number of examples, we show that PL outperforms existing particle filtering alternatives and proves to be a competitor to MCMC."
particle_filters
filtering
state-space_models
state_estimation
estimation
time_series
statistics
august 2010 by cshalizi
Approximate Methods for State-Space Models - Journal of the American Statistical Association - 105(489):170
march 2010 by cshalizi
Huzzah!
self-centered
markov_models
state_estimation
filtering
laplace_approximation
stochastic_processes
statistical_inference_for_stochastic_processes
time_series
statistics
march 2010 by cshalizi
Failures of sequential Bayesian filters and the successes of shadowing filters in tracking of nonlinear deterministic and stochastic systems
july 2009 by cshalizi
"Sequential Bayesian filters, such as particle filters, are often presented as an ideal means of tracking the state of nonlinear systems. Here shadowing filters are demonstrated to perform better than sequential filters at tracking under specific circumstances. The success of shadowing filters is attributed to avoiding both well-known deficiencies of particle filters, and some newly identified problems." Huh.
particle_filters
filtering
state_estimation
state-space_models
time_series
july 2009 by cshalizi
Discovery of the Kalman Filter as a Practical Tool for Aerospace and Industry (McGee and Schmidt)
june 2009 by cshalizi
So, how _do_ you aim for the stars and/or make sure you hit London?
filtering
control_theory
state_estimation
kalman_filter
extended_kalman_filter
apollo_project
nasa
history_of_technology
time_series
simulation
scientific_computing
to:blog
june 2009 by cshalizi
Monte Carlo method for adaptively estimating the unknown parameters and the dynamic state of chaotic systems
june 2009 by cshalizi
Some variant of particle filtering with state augmentation?
time_series
statistics
dynamical_systems
particle_filters
state_estimation
june 2009 by cshalizi
CRAN - Package sspir
february 2009 by cshalizi
State-space modeling with linear/Gaussian state evolution and generalized linear models for the observations. Looks reasonable, lacks a few improvements like diffuse initial conditions in the Kalman filter.
state-space_models
time_series
R
filtering
state_estimation
to_teach
february 2009 by cshalizi
Hidden Markov Models and Dynamical Systems - Andrew Fraser
november 2008 by cshalizi
Andy's book is appearing in print at last. (SIAM seems to indicate it's available now, the usual online bookstores say not until the end of the year.)
markov_models
dynamical_systems
books:recommended
state_estimation
filtering
state-space_models
statistical_inference_for_stochastic_processes
fraser.andrew
via:guslacerda
kith_and_kin
to_teach:complexity-and-inference
november 2008 by cshalizi
Cybernetics: Or Control & Communication in the Animal & the Machine - Norbert Wiener [@Labyrinth]
august 2008 by cshalizi
One of those books which shape how you think about everything.
books:recommended
cybernetics
stochastic_processes
time_series
prediction
feedback
autonomous_agents
autonomy
statistical_mechanics
state_estimation
self-organization
machine_learning
artificial_life
control
communication
homeostasis
philosophy_of_science
information_theory
arrow_of_time
teleology
teleonomy
wiener.norbert
freedom_as_self-control
august 2008 by cshalizi
On error-free filtering of finite-state singular processes under dependent distortions - Prelov and van der Meulen
february 2008 by cshalizi
When can the state of one process be recovered without error from another? (Use of infinite time limit here is not quite relevant to my immediate needs so must see how to modify proof.)
prelov.v._v.
van_der_meulen.e._c.
filtering
state_estimation
information_theory
re:AoS_project
february 2008 by cshalizi
PLoS Computational Biology - From Inverse Problems in Mathematical Physiology to Quantitative Differential Diagnoses
statistics inverse_problems automated_diagnosis state_estimation zenker.sven rubin.jonathan clermont.gilles have_read computational_statistics heard_the_talk identifiability in_NB
november 2007 by cshalizi
statistics inverse_problems automated_diagnosis state_estimation zenker.sven rubin.jonathan clermont.gilles have_read computational_statistics heard_the_talk identifiability in_NB
november 2007 by cshalizi
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